BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022H05LP1|AL427965
(603 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig941 1176 0.0
>3x_Contig941
Length = 3149
Score = 1176 bits (592), Expect = 0.0
Identities = 596/598 (99%)
Strand = Plus / Plus
Query: 1 gatcatcgtgtacgatgtgagggacggaatttgttgcacgaaaaaggggaaaagctgcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gatcatcgtgtacgatgtgagggacggaatttgttgcacgaaaaaggggaaaagctgcac 1020
Query: 61 atttgatctgagatgcaaaagatgtgtatatccgggtaagtacgtcacatgatactacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 atttgatctgagatgcaaaagatgtgtatatccgggtaagtacgtcacatgatactacaa 1080
Query: 121 ctgtaattgtggaagctaccttctccgaagaaagttcctgttccctttttttccctcgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ctgtaattgtggaagctaccttctccgaagaaagttcctgttccctttttttccctcgga 1140
Query: 181 tagaagacaagtccttaacgacactatatgtacgacgacgctttgggatagagtaattta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 tagaagacaagtccttaacgacactatatgtacgacgacgctttgggatagagtaattta 1200
Query: 241 ttttagataggcatttaatgatgatacacaatacgtatcacgtgcccagtctaattccct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ttttagataggcatttaatgatgatacacaatacgtatcacgtgcccagtctaattccct 1260
Query: 301 gacttgctccgtttgttgctactgcaatgtgtatcggacatttattttgctatcaaggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gacttgctccgtttgttgctactgcaatgtgtatcggacatttattttgctatcaaggct 1320
Query: 361 tagtgagagagcgaaacggttcggagatgaatccggaggttctttccatgctgttcttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 tagtgagagagcgaaacggttcggagatgaatccggaggttctttccatgctgttcttgt 1380
Query: 421 ttacataattcatgcggtttccagttgtttttttttttaaatttcttcaatcgagaatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ttacataattcatgcggtttccagttgtttttttttttaaatttcttcaatcgagaatca 1440
Query: 481 gtgaatatcagcacacgagawattgggcatcgccttaaaacagaaaatgcgccatatatt 540
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 1441 gtgaatatcagcacacgagatattgggcatcgccttaaaacagaaaatgcgctatatatt 1500
Query: 541 aaagatatgggtttaacttacatagaatatgtatatatatatatatatatatatatat 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 aaagatatgggtttaacttacatagaatatgtatatatatatatatatatatatatat 1558
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 18,592
Number of Sequences: 1807
Number of extensions: 18592
Number of successful extensions: 4916
Number of sequences better than 1.0e-20: 1
length of query: 603
length of database: 10,358,551
effective HSP length: 16
effective length of query: 587
effective length of database: 10,329,639
effective search space: 6063498093
effective search space used: 6063498093
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)